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A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.

Pages

Posts

Dunder Methods

1 minute read

Published:

What are special methods?

They are ‘predefined’ methods that allow you to customize the behavior of classes. Can also be referred to as “dunder” (double-underscore) methods.

KNN-Graph

3 minute read

Published:

Let’s say we have a dataset of 10 molecules (A through J), and we want to construct a 3-NN graph (k=3) where k indicates the number of neighbours.

TMAP

5 minute read

Published:

The general process of TMAP looks like this: image

LSH Forest

3 minute read

Published:

Locality-sensitive hashing or LSH, allows us to focus on pairs that are likely to be similar, instead of having to look at all pairs possible. It reduces therefore the amount of computational time required by a brute force approach.

MinHashing

4 minute read

Published:

TL;DR: MinHashing is a way to reduce the dimensionality of fingerprints. Instead of comparing 512-bit vectors directly -these are the vectors that we obtain after the fingerprint is applied to a SMILES format molecule-, MinHash reduces these vectors to smaller hashes that preserve similarity between molecules.

More About me

1 minute read

Published:

This website will primarily focus on my professional and academic development, so you likely won’t find posts on topics like politics, philosophy, religion, music, or personal anecdotes. However, to add a more personal touch, here are a few of my favorite books on topics I do enjoy—though, these days, finding time to read them is a luxury:

applied_optimization

computer_vision

Building Cameras

Published:

lens camera, DOF, lens flaws, desmosaicing, bay array and color moiré

Image Filtering

Published:

Image filtering covering convolutions, denoising and more

Edge detection

Published:

Edge detection. partial derivatives and gradient of an image.

coursework

machine_learning

portfolio

Fused Fingerprints TMAP

Published:

Visualization of large ChemBL dataset merging MAPC fingerprints for every entry with same Target ID

publications

Paper Title Number 4

Published in GitHub Journal of Bugs, 2024

This paper is about fixing template issue #693.

Recommended citation: Your Name, You. (2024). "Paper Title Number 3." GitHub Journal of Bugs. 1(3).
Download Paper

talks

teaching